MS-Fit Search Results


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Sample ID (comment): D011
Database searched: SwissProt.7.25.2001
Molecular weight search (1000 - 100000 Da) selects 94194 entries.
Full pI range: 99754 entries.
Species search ( HUMAN MOUSE ) selects 11713 entries.
Combined molecular weight, pI and species searches select 10428 entries.
Pre searches select 10428 entries.
MS-Fit search selects 2986 entries (results displayed for top 5 matches).

Parameters Used in Search

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
Peptide Mass
Tolerance (+/-)
Peptide Masses
are
Digest
Used
Max. # Missed
Cleavages
Cysteines
Modified by
Peptide
N terminus
Peptide
C terminus
4 100.000 ppm monoisotopic Trypsin 3 unmodified Hydrogen (H) Free Acid (O H)

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesAccession #Protein Name
11.56e+01130/60 (50%) 56782.9 / 5.99HUMANPROTEIN DISULFIDE ISOMERASE A3 PRECURSOR (DISULFIDE ISOMERASE ER-60) (ERP60) (58 KDA MICROSOMAL PROTEIN) (P58) (ERP57)
22.87e+00416/60 (26%) 56621.8 / 5.99MOUSEPROTEIN DISULFIDE ISOMERASE A3 PRECURSOR (DISULFIDE ISOMERASE ER-60) (ERP60) (58 KDA MICROSOMAL PROTEIN) (P58) (ERP57)
31e+00419/60 (31%) 88931.0 / 8.68HUMANCULLIN HOMOLOG 3 (CUL-3)
44.32e+00318/60 (30%) 88949.1 / 8.65MOUSECULLIN HOMOLOG 3 (CUL-3)
51.72e+00310/60 (16%) 25760.1 / 8.87MOUSETHYMIDINE KINASE, CYTOSOLIC

Detailed Results

1. 30/60 matches (50%). 56782.9 Da, pI = 5.99. Acc. # P30101. HUMAN. PROTEIN DISULFIDE ISOMERASE A3 PRECURSOR (DISULFIDE ISOMERASE ER-60) (ERP60) (58 KDA MICROSOMAL PROTEIN) (P58) (ERP57).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
782.3693782.357215.4681 141 146(R)(K)
782.3693782.358613.7586 275 280(K)(N)
877.5022877.489614.3546 297 304(K)(K)
1084.60631084.567935.4539 95 104(K)(I)
1172.58251172.541035.3760 336 344(K)(D)
1179.65781179.587159.9878 174 183(K)(F)
1188.57491188.535932.8061 336 344(K)FVMQEEFSR(D)1Met-ox
1191.62251191.601018.0850 63 73(R)(L)
1236.56311236.513340.3133 108 119(R)(T)
1341.73941341.684341.0904 449 460(R)(K)
1359.71271359.658539.8903 352 362(R)(R)
1368.74111368.664755.8279 367 379(K)(V)
1370.76211370.695648.5435 472 482(R)(E)
1469.86381469.779357.4789 449 461(R)(L)
1488.81141488.679388.7266 336 347(K)FVMQEEFSRDGK(A)1Met-ox
1515.83961515.759652.7525 352 363(R)(Y)
1579.87361579.833225.5940 483 496(R)(K)
1619.88261619.784560.5617 259 271(K)(N)
1652.86651652.766960.2662 105 119(K)(T)
1664.85601664.759058.2748 434 448(K)(G)
1680.83481680.753948.1325 434 448(K)MDATANDVPSPYEVR(G)1Met-ox
1707.87511707.9281-31.0374 483 497(R)(K)
1759.00461758.902657.9439 131 146(K)(K)
1833.00761832.903057.0608 380 395(K)(D)
1887.09821886.997653.3370 130 146(K)(K)
1887.09821886.997653.3370 131 147(K)(F)
2015.20302015.092654.8088 130 147(K)(F)
2348.23212348.072368.0489 153 173(K)(A)
2575.49862575.304475.4010 306 329(K)(T)
2703.58562703.399468.8960 305 329(R)(T)
2877.60552877.391574.3695 235 258(K)FIQENIFGICPHMTEDNKDLIQGK(D)1Met-ox 1Cys-am
2938.62882938.378785.1130 148 173(K)(A)

Click link below to search for another component.

Click individual mass to do a non-specific cleavage search.

The matched peptides cover 54% (273/505AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 50.0 Mean Error = 47.5007 ppm Data Tolerance = 48.2675 ppm Mean Missed Cleavages = 0.5

2. 16/60 matches (26%). 56621.8 Da, pI = 5.99. Acc. # P27773. MOUSE. PROTEIN DISULFIDE ISOMERASE A3 PRECURSOR (DISULFIDE ISOMERASE ER-60) (ERP60) (58 KDA MICROSOMAL PROTEIN) (P58) (ERP57).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
782.3693782.357215.4681 140 145(R)(K)
782.3693782.358613.7586 274 279(K)(N)
877.5022877.489614.3546 296 303(K)(K)
1084.60631084.567935.4539 94 103(K)(I)
1172.58251172.541035.3760 335 343(K)(D)
1179.65781179.587159.9878 173 182(K)(F)
1188.57491188.535932.8061 335 343(K)FVMQEEFSR(D)1Met-ox
1191.62251191.601018.0850 63 73(R)(L)
1341.73941341.684341.0904 448 459(K)(K)
1469.86381469.779357.4789 448 460(K)(L)
1488.81141488.679388.7266 335 346(K)FVMQEEFSRDGK(A)1Met-ox
1652.86651652.747871.8209 433 447(K)MDATANDVPSPYEVK(G)1Met-ox
1759.00461758.902657.9439 130 145(K)(K)
1887.09821886.997653.3370 129 145(K)(K)
1887.09821886.997653.3370 130 146(K)(F)
2015.20302015.092654.8088 129 146(K)(F)
2575.49862575.293279.7633 252 273(K)(G)
2877.60552877.427961.7234 233 257(K)(D)

Click link below to search for another component.

Click individual mass to do a non-specific cleavage search.

The matched peptides cover 28% (144/504AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 26.7 Mean Error = 46.9622 ppm Data Tolerance = 45.2257 ppm Mean Missed Cleavages = 0.8

3. 19/60 matches (31%). 88931.0 Da, pI = 8.68. Acc. # Q13618. HUMAN. CULLIN HOMOLOG 3 (CUL-3).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
590.2897590.3150-42.8545 1 6(-)SNLSK(G)Acet N
1113.66371113.6744-9.6668 743 751(K)(E)
1236.56311236.6483-68.8524 7 17(K)(I)
1341.73941341.705425.3416 224 235(K)(K)
1370.76211370.644885.5887 18 28(R)IRAFPMTMDEK(Y)2Met-ox
1469.86381469.800443.1024 224 236(K)(V)
1474.86111474.764165.8173 402 414(K)(A)
1487.85451487.811029.2499 337 349(K)(S)
1619.88261619.807246.5571 185 198(R)NACQMLMILGLEGR(S)1Cys-am
1652.86651652.9270-36.6261 701 714(K)(K)
1680.83481680.8478-7.7351 445 459(K)(T)
1759.00461758.948931.6304 399 414(K)(A)
1765.83811765.738256.6057 312 326(K)(A)
1765.83811765.9197-46.1954 695 709(K)(I)
1870.08571870.033328.0325 626 642(R)(V)
1887.09821887.043928.8097 398 414(K)(A)
1984.14111984.082729.4424 672 689(R)(E)
1994.10051994.1221-10.8044 715 731(R)(A)
2707.54102707.442836.2961 589 610(R)KHILQVSTFQMTILMLFNNREK(Y)1Met-ox
2877.60552877.388475.4659 302 326(K)(A)

Click link below to search for another component.

Click individual mass to do a non-specific cleavage search.

The matched peptides cover 29% (228/768AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 31.7 Mean Error = 17.9603 ppm Data Tolerance = 85.5343 ppm Mean Missed Cleavages = 1.4

4. 18/60 matches (30%). 88949.1 Da, pI = 8.65. Acc. # Q9JLV5. MOUSE. CULLIN HOMOLOG 3 (CUL-3).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
590.2897590.3150-42.8545 1 6(-)SNLSK(G)Acet N
1113.66371113.6744-9.6668 743 751(K)(E)
1236.56311236.6483-68.8524 7 17(K)(I)
1341.73941341.705425.3416 224 235(K)(K)
1370.76211370.644885.5887 18 28(R)IRAFPMTMDEK(Y)2Met-ox
1469.86381469.800443.1024 224 236(K)(V)
1474.86111474.764165.8173 402 414(K)(A)
1487.85451487.811029.2499 337 349(K)(S)
1619.88261619.807246.5571 185 198(R)NACQMLMILGLEGR(S)1Cys-am
1652.86651652.9270-36.6261 701 714(K)(K)
1680.83481680.8478-7.7351 445 459(K)(T)
1759.00461758.948931.6304 399 414(K)(A)
1765.83811765.9197-46.1954 695 709(K)(I)
1870.08571870.033328.0325 626 642(R)(V)
1887.09821887.043928.8097 398 414(K)(A)
1984.14111984.082729.4424 672 689(R)(E)
1994.10051994.1221-10.8044 715 731(R)(A)
2707.54102707.442836.2961 589 610(R)KHILQVSTFQMTILMLFNNREK(Y)1Met-ox

Click link below to search for another component.

Click individual mass to do a non-specific cleavage search.

The matched peptides cover 26% (203/768AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 30.0 Mean Error = 12.6185 ppm Data Tolerance = 83.2256 ppm Mean Missed Cleavages = 1.3

5. 10/60 matches (16%). 25760.1 Da, pI = 8.87. Acc. # P04184. MOUSE. THYMIDINE KINASE, CYTOSOLIC.
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1172.58251172.526647.6471 149 158(K)(E)
1188.57491188.521544.9120 149 158(K)LTAVCMECFR(E)1Met-ox
1474.86111474.809235.2238 19 32(R)(S)
1680.83481680.9623-75.8602 42 54(R)RFQIAQYKCLVIK(Y)1Cys-am
1710.97971710.881557.4108 219 233(R)(-)
1833.00761832.896560.6210 171 186(K)EVEVIGGADKYHSVCR(L)1Cys-am
1887.09821887.056622.0510 43 57(R)FQIAQYKCLVIKYAK(D)1Cys-am
1994.10051993.918691.2678 149 164(K)LTAVCMECFREAAYTK(R)1Met-ox 2Cys-am
2348.23212348.2583-11.1573 19 39(R)(V)
2575.49862575.272787.7025 50 70(K)CLVIKYAKDTRYSNSFSTHDR(N)1Cys-am

Click link below to search for another component.

Click individual mass to do a non-specific cleavage search.

The matched peptides cover 41% (97/233AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 16.7 Mean Error = 35.9819 ppm Data Tolerance = 98.7456 ppm Mean Missed Cleavages = 1.2


MS-Fit 3.3.1, ProteinProspector 3.4.1
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