MS-Fit Search Results


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Sample ID (comment): HSG12
Database searched: SwissProt.r36
Molecular weight search (1000 - 100000 Da) selects 69977 entries.
Full pI range: 74019 entries.
Species search ( HUMAN MOUSE ) selects 8141 entries.
Combined molecular weight, pI and species searches select 7373 entries.
MS-Fit search selects 264 entries (results displayed for top 5 matches).

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
4
Peptide Mass
Tolerance (+/-)
100.000 ppm
Peptide Masses
are
monoisotopic
Digest
Used
Trypsin
Max. # Missed
Cleavages
3
Cysteines
Modified by
unmodified
Peptide
N terminus
Hydrogen (H)
Peptide
C terminus
Free Acid (O H)
Input #
Peptide Masses
20

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesSwissProt.r36
Accession #
Protein Name
12.92e+00311/20 (55%) 28672.9 / 6.75HUMANPHOSPHOGLYCERATE MUTASE, BRAIN FORM (EC 5.4.2.1) (PGAM-B) (EC 5.4.2.4) (EC 3.1.3.13) (BPG-DEPENDENT PGAM).
25159/20 (45%) 67337.6 / 5.65MOUSEALPHA-FETOPROTEIN PRECURSOR (ALPHA-FETOGLOBULIN) (ALPHA-1- FETOPROTEIN).
33726/20 (30%) 27368.4 / 8.78HUMANRHO-RELATED GTP-BINDING PROTEIN RHO8.
41954/20 (20%) 28635.1 / 9.00HUMANPHOSPHOGLYCERATE MUTASE, MUSCLE FORM (EC 5.4.2.1) (PGAM-M) (EC 5.4.2.4) (EC 3.1.3.13) (BPG-DEPENDENT PGAM).
51364/20 (20%) 46084.8 / 8.62MOUSECOUP TRANSCRIPTION FACTOR 1 (COUP-TF1) (COUP-TFI).

Detailed Results


1. 11/20 matches (55%). 28672.9 Da, pI = 6.75. Acc. # P18669. HUMAN. PHOSPHOGLYCERATE MUTASE, BRAIN FORM (EC 5.4.2.1) (PGAM-B) (EC 5.4.2.4) (EC 3.1.3.13) (BPG-DEPENDENT PGAM)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1150.76241150.669780.5827 180 190(R)(G)
1312.67171312.603451.9914 10 20(R)(F)
1683.98551683.911044.2443 162 175(R)(E)
1949.99101949.906743.2170 46 61(R)DAGYEFDICFTSVQKR(A)1Cys-am
1979.96151979.877542.3833 21 38(R)(R)
2131.22952131.122250.3742 222 239(K)NLKPIKPMQFLGDEETVR(K)1Met-ox
2136.07012135.978742.8097 21 39(R)(G)
2259.29642259.217135.1155 222 240(K)NLKPIKPMQFLGDEETVRK(A)1Met-ox
2433.20782433.107341.3001 117 137(R)SYDVPPPPMEPDHPFYSNISK(D)1Met-ox
2439.28022439.171344.6073 141 161(R)YADLTEDQLPSCESLKDTIAR(A)1Cys-am
2589.35512589.208456.6531 116 137(R)RSYDVPPPPMEPDHPFYSNISK(D)1Met-ox

9 unmatched masses: 1344.6427 1705.9689 2070.4792 2071.3499 2152.0725 2168.0699 2211.1822 2334.2585 2455.1895

The matched peptides cover 52% (133/253 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


2. 9/20 matches (45%). 67337.6 Da, pI = 5.65. Acc. # P02772. MOUSE. ALPHA-FETOPROTEIN PRECURSOR (ALPHA-FETOGLOBULIN) (ALPHA-1- FETOPROTEIN)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1312.67171312.584366.5405 191 201(K)(R)
1979.96151980.0337-36.4690 195 210(K)EECFQTKRASIAKELR(E)1Cys-am
2131.22952131.053482.6360 126 145(K)(A)
2136.07012135.982940.8250 465 483(K)WSGCGEGMADIFIGHLCIR(N)1Cys-am
2152.07252151.977843.9915 465 483(K)WSGCGEGMADIFIGHLCIR(N)1Met-ox 1Cys-am
2168.06992168.034016.5390 514 531(R)(D)
2259.29642259.148465.5476 125 145(R)(A)
2334.25852334.034296.1114 380 399(K)CSQSGNLPGCQDNLEEELQK(H)2Cys-am
2433.20782433.165017.5723 280 300(K)VMTYICSQQNILSSKIAECCK(L)1Cys-am

11 unmatched masses: 1150.7624 1344.6427 1683.9855 1705.9689 1949.9910 2070.4792 2071.3499 2211.1822 2439.2802 2455.1895 2589.3551

The matched peptides cover 19% (119/605 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


3. 6/20 matches (30%). 27368.4 Da, pI = 8.78. Acc. # P52199. HUMAN. RHO-RELATED GTP-BINDING PROTEIN RHO8..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1979.96151980.0337-36.4690 217 234(R)(K)
2131.22952131.129446.9905 5 23(R)(C)
2136.07012136.1348-30.2803 216 234(K)(K)
2152.07252152.06055.5769 119 136(K)GEIQEFCPNTKMLLVGCK(S)2Cys-am
2152.07252152.1297-26.5855 216 234(K)RISHMPSRPELSAVATDLR(K)1Met-ox
2168.06992168.05546.6932 119 136(K)GEIQEFCPNTKMLLVGCK(S)1Met-ox 2Cys-am
2211.18222211.071650.0515 168 187(K)QIGAATYIECSALQSENSVR(D)1Cys-am

14 unmatched masses: 1150.7624 1312.6717 1344.6427 1683.9855 1705.9689 1949.9910 2070.4792 2071.3499 2259.2964 2334.2585 2433.2078 2439.2802 2455.1895 2589.3551

The matched peptides cover 31% (76/244 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


4. 4/20 matches (20%). 28635.1 Da, pI = 9.00. Acc. # P15259. HUMAN. PHOSPHOGLYCERATE MUTASE, MUSCLE FORM (EC 5.4.2.1) (PGAM-M) (EC 5.4.2.4) (EC 3.1.3.13) (BPG-DEPENDENT PGAM)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1150.76241150.669780.5827 180 190(R)(G)
1683.98551683.911044.2443 162 175(R)(A)
1705.96891705.883550.0449 141 156(R)(D)
2259.29642259.163059.0827 46 64(K)(T)

16 unmatched masses: 1312.6717 1344.6427 1949.9910 1979.9615 2070.4792 2071.3499 2131.2295 2136.0701 2152.0725 2168.0699 2211.1822 2334.2585 2433.2078 2439.2802 2455.1895 2589.3551

The matched peptides cover 23% (60/252 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


5. 4/20 matches (20%). 46084.8 Da, pI = 8.62. Acc. # Q60632. MOUSE. COUP TRANSCRIPTION FACTOR 1 (COUP-TF1) (COUP-TFI)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
2211.18222210.992385.9179 70 91(K)(S)
2439.28022439.133860.0030 92 111(K)SSGKHYGQFTCEGCKSFFKR(S)2Cys-am
2455.18952455.16589.6453 126 144(R)NCPIDQHHRNQCQYCRLKK(C)1Cys-am
2589.35512589.287026.2784 323 346(K)AIVLFTSDACGLSDAAHIESLQEK(S)1Cys-am

16 unmatched masses: 1150.7624 1312.6717 1344.6427 1683.9855 1705.9689 1949.9910 1979.9615 2070.4792 2071.3499 2131.2295 2136.0701 2152.0725 2168.0699 2259.2964 2334.2585 2433.2078

The matched peptides cover 20% (85/422 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


MS-Fit 3.1.1, ProteinProspector 3.2.1
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