MS-Fit Search Results


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Sample ID (comment): HSG015
Database searched: SwissProt.r36
Molecular weight search (1000 - 100000 Da) selects 69977 entries.
Full pI range: 74019 entries.
Species search ( HUMAN MOUSE ) selects 8141 entries.
Combined molecular weight, pI and species searches select 7373 entries.
MS-Fit search selects 253 entries (results displayed for top 5 matches).

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
4
Peptide Mass
Tolerance (+/-)
100.000 ppm
Peptide Masses
are
monoisotopic
Digest
Used
Trypsin
Max. # Missed
Cleavages
3
Cysteines
Modified by
unmodified
Peptide
N terminus
Hydrogen (H)
Peptide
C terminus
Free Acid (O H)
Input #
Peptide Masses
25

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesSwissProt.r36
Accession #
Protein Name
11.58e+0049/25 (36%) 32560.2 / 4.62MOUSENUCLEOPHOSMIN (NPM) (NUCLEOLAR PHOSPHOPROTEIN B23) (NUMATRIN) (NUCLEOLAR PROTEIN NO38).
21.58e+0049/25 (36%) 32575.2 / 4.64HUMANNUCLEOPHOSMIN (NPM) (NUCLEOLAR PHOSPHOPROTEIN B23) (NUMATRIN) (NUCLEOLAR PROTEIN NO38).
31.25e+0036/25 (24%) 57747.0 / 7.57HUMANPYRUVATE KINASE, M1 (MUSCLE) ISOZYME (EC 2.7.1.40) (CYTOSOLIC THYROID HORMONE-BINDING PROTEIN) (CTHBP) (THBP1).
41.25e+0036/25 (24%) 57783.0 / 7.95HUMANPYRUVATE KINASE, M2 ISOZYME (EC 2.7.1.40).
51.19e+0034/25 (16%) 25565.2 / 4.67HUMANCYTOCHROME C OXIDASE POLYPEPTIDE II (EC 1.9.3.1).

Detailed Results


1. 9/25 matches (36%). 32560.2 Da, pI = 4.62. Acc. # Q61937. MOUSE. NUCLEOPHOSMIN (NPM) (NUCLEOLAR PHOSPHOPROTEIN B23) (NUMATRIN) (NUCLEOLAR PROTEIN NO38)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
539.2872539.240087.4291 272 275(K)(M)
931.5241931.473754.1438 238 246(K)(A)
1568.80261568.730545.9665 33 45(K)(T)
1819.89251819.843726.7920 276 289(R)(K)
1835.88791835.838726.8301 276 289(R)MTDQEAIQDLWQWR(K)1Met-ox
2161.09332161.012337.4703 55 73(K)DELHIVEAEAMNYEGSPIK(V)1Met-ox
2227.25762227.216118.6399 81 101(K)(L)
2243.28382243.211032.4733 81 101(K)MSVQPTVSLGGFEITPPVVLR(L)1Met-ox
2945.56052945.456635.2559 46 73(R)TVSLGAGAKDELHIVEAEAMNYEGSPIK(V)1Met-ox

16 unmatched masses: 568.1811 656.1342 1296.7507 1775.1724 1776.1174 1777.0203 1791.8891 1835.3731 1851.9002 1867.9061 1941.0091 2093.1613 2182.4240 2211.1976 2242.7232 2465.2582

The matched peptides cover 30% (89/292 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


2. 9/25 matches (36%). 32575.2 Da, pI = 4.64. Acc. # P06748. HUMAN. NUCLEOPHOSMIN (NPM) (NUCLEOLAR PHOSPHOPROTEIN B23) (NUMATRIN) (NUCLEOLAR PROTEIN NO38)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
539.2872539.240087.4291 274 277(K)(M)
931.5241931.473754.1438 240 248(K)(A)
1568.80261568.730545.9665 33 45(K)(T)
1819.89251819.843726.7920 278 291(R)(K)
1835.88791835.838726.8301 278 291(R)MTDQEAIQDLWQWR(K)1Met-ox
2161.09332161.012337.4703 55 73(K)DELHIVEAEAMNYEGSPIK(V)1Met-ox
2227.25762227.216118.6399 81 101(K)(L)
2243.28382243.211032.4733 81 101(K)MSVQPTVSLGGFEITPPVVLR(L)1Met-ox
2945.56052945.456635.2559 46 73(R)TVSLGAGAKDELHIVEAEAMNYEGSPIK(V)1Met-ox

16 unmatched masses: 568.1811 656.1342 1296.7507 1775.1724 1776.1174 1777.0203 1791.8891 1835.3731 1851.9002 1867.9061 1941.0091 2093.1613 2182.4240 2211.1976 2242.7232 2465.2582

The matched peptides cover 30% (89/294 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


3. 6/25 matches (24%). 57747.0 Da, pI = 7.57. Acc. # P14618. HUMAN. PYRUVATE KINASE, M1 (MUSCLE) ISOZYME (EC 2.7.1.40) (CYTOSOLIC THYROID HORMONE-BINDING PROTEIN) (CTHBP) (THBP1)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1819.89251819.9484-30.7193 319 335(R)(K)
1835.88791835.9433-30.1802 319 335(R)AGKPVICATQMLESMIK(K)1Met-ox
1851.90021851.9382-20.5232 319 335(R)AGKPVICATQMLESMIK(K)2Met-ox
1941.00911940.925043.3141 151 165(K)CDENILWLDYKNICK(V)1Cys-am
2161.09332161.2120-54.9286 166 185(K)(Q)
2465.25822465.2928-14.0377 92 114(R)(G)

19 unmatched masses: 539.2872 568.1811 656.1342 931.5241 1296.7507 1568.8026 1775.1724 1776.1174 1777.0203 1791.8891 1835.3731 1867.9061 2093.1613 2182.4240 2211.1976 2227.2576 2242.7232 2243.2838 2945.5605

The matched peptides cover 14% (75/530 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


4. 6/25 matches (24%). 57783.0 Da, pI = 7.95. Acc. # P14786. HUMAN. PYRUVATE KINASE, M2 ISOZYME (EC 2.7.1.40)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1819.89251819.9484-30.7193 319 335(R)(K)
1835.88791835.9433-30.1802 319 335(R)AGKPVICATQMLESMIK(K)1Met-ox
1851.90021851.9382-20.5232 319 335(R)AGKPVICATQMLESMIK(K)2Met-ox
1941.00911940.925043.3141 151 165(K)CDENILWLDYKNICK(V)1Cys-am
2161.09332161.2120-54.9286 166 185(K)(Q)
2465.25822465.2928-14.0377 92 114(R)(G)

19 unmatched masses: 539.2872 568.1811 656.1342 931.5241 1296.7507 1568.8026 1775.1724 1776.1174 1777.0203 1791.8891 1835.3731 1867.9061 2093.1613 2182.4240 2211.1976 2227.2576 2242.7232 2243.2838 2945.5605

The matched peptides cover 14% (75/530 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


5. 4/25 matches (16%). 25565.2 Da, pI = 4.67. Acc. # P00403. HUMAN. CYTOCHROME C OXIDASE POLYPEPTIDE II (EC 1.9.3.1)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1851.90021851.9414-22.2265 83 98(R)(S)
1867.90611867.9363-16.1733 83 98(R)ILYMTDEVNDPSLTIK(S)1Met-ox
2227.25762227.161942.9512 152 171(R)(T)
2243.28382243.156856.6115 152 171(R)MMITSQDVLHSWAVPTLGLK(T)1Met-ox

21 unmatched masses: 539.2872 568.1811 656.1342 931.5241 1296.7507 1568.8026 1775.1724 1776.1174 1777.0203 1791.8891 1819.8925 1835.3731 1835.8879 1941.0091 2093.1613 2161.0933 2182.4240 2211.1976 2242.7232 2465.2582 2945.5605

The matched peptides cover 15% (36/227 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


MS-Fit 3.1.1, ProteinProspector 3.2.1
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