MS-Fit Search Results


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Sample ID (comment): HSG021
Database searched: SwissProt.r36
Molecular weight search (1000 - 100000 Da) selects 69977 entries.
Full pI range: 74019 entries.
Species search ( HUMAN MOUSE ) selects 8141 entries.
Combined molecular weight, pI and species searches select 7373 entries.
MS-Fit search selects 509 entries (results displayed for top 5 matches).

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
4
Peptide Mass
Tolerance (+/-)
100.000 ppm
Peptide Masses
are
monoisotopic
Digest
Used
Trypsin
Max. # Missed
Cleavages
3
Cysteines
Modified by
unmodified
Peptide
N terminus
Hydrogen (H)
Peptide
C terminus
Free Acid (O H)
Input #
Peptide Masses
25

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesSwissProt.r36
Accession #
Protein Name
12.43e+00514/25 (56%) 39289.0 / 8.39HUMANFRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) A (MUSCLE).
24.92e+0037/25 (28%) 39224.9 / 8.40MOUSEFRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) A (MUSCLE).
32274/25 (16%) 38358.6 / 7.99MOUSEHOMEOBOX PROTEIN HOX-D10 (HOX-4.5) (HOX-5.3).
41486/25 (24%) 61906.0 / 6.79HUMANDIHYDROPYRIMIDINASE RELATED PROTEIN-4 (DRP-4) (ULIP4 PROTEIN).
51417/25 (28%) 86828.5 / 6.47MOUSEDNA-REPAIR PROTEIN COMPLEMENTING XP-D CELLS (XERODERMA PIGMENTOSUM GROUP D COMPLEMENTING PROTEIN) (DNA EXCISION REPAIR PROTEIN ERCC-2).

Detailed Results


1. 14/25 matches (56%). 39289.0 Da, pI = 8.39. Acc. # P04075. HUMAN. FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) A (MUSCLE)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1093.62561093.564256.1716 322 330(K)(A)
1342.77401342.711946.2350 87 98(K)(S)
1434.78551434.726940.8446 1 12(-)(K)
1646.88071646.809843.0341 42 55(K)(R)
1646.88071646.809843.0341 43 56(R)(F)
1691.89471691.842730.7688 243 257(K)FSHEEIAMATVTALR(R)1Met-ox
1707.86651707.9005-19.8833 139 152(K)KDGADFAKWRCVLK(I)1Cys-am
1823.00091822.967818.1676 289 303(K)CPLLKPWALTFSYGR(A)1Cys-am
1847.98411847.943821.8047 243 258(K)FSHEEIAMATVTALRR(T)1Met-ox
2107.13062107.097015.9251 153 172(K)(Y)
2123.16342123.091933.6820 153 172(K)IGEHTPSALAIMENANVLAR(Y)1Met-ox
2228.10562228.026035.7368 342 363(K)(-)
2272.23052272.142138.9179 111 133(K)(C)
2705.21102705.4045-71.5263 318 341(K)ENLKAAQEEYVKRALANSLACQGK(Y)1Cys-am
3057.63313057.574419.1922 259 288(R)(C)

11 unmatched masses: 1296.7378 1446.7813 1449.8578 1940.9959 1994.0426 2062.3329 2079.1645 2211.1639 2273.2038 2299.2215 2465.2766

The matched peptides cover 55% (202/363 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


2. 7/25 matches (28%). 39224.9 Da, pI = 8.40. Acc. # P05064. MOUSE. FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) A (MUSCLE)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1342.77401342.711946.2350 87 98(K)(S)
1646.88071646.809843.0341 42 55(K)(R)
1646.88071646.809843.0341 43 56(R)(F)
1707.86651707.9005-19.8833 139 152(K)KDGADFAKWRCVLK(I)1Cys-am
1823.00091822.967818.1676 289 303(K)CPLLKPWALTFSYGR(A)1Cys-am
2107.13062107.097015.9251 153 172(K)(Y)
2123.16342123.091933.6820 153 172(K)IGEHTPSALAIMENANVLAR(Y)1Met-ox
2272.23052272.142138.9179 111 133(K)(C)

18 unmatched masses: 1093.6256 1296.7378 1434.7855 1446.7813 1449.8578 1691.8947 1847.9841 1940.9959 1994.0426 2062.3329 2079.1645 2211.1639 2228.1056 2273.2038 2299.2215 2465.2766 2705.2110 3057.6331

The matched peptides cover 27% (99/363 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


3. 4/25 matches (16%). 38358.6 Da, pI = 7.99. Acc. # P28359. MOUSE. HOMEOBOX PROTEIN HOX-D10 (HOX-4.5) (HOX-5.3)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1691.89471691.816246.4267 230 245(R)(E)
2107.13062107.022951.0977 230 248(R)SCLAEVSVSSPEVQEKESK(E)1Cys-am
2228.10562228.1062-0.2433 134 153(R)(L)
2299.22152299.143334.0071 134 153(R)LVPESCPVENPEVPVPGYFR(L)1Cys-am

21 unmatched masses: 1093.6256 1296.7378 1342.7740 1434.7855 1446.7813 1449.8578 1646.8807 1707.8665 1823.0009 1847.9841 1940.9959 1994.0426 2062.3329 2079.1645 2123.1634 2211.1639 2272.2305 2273.2038 2465.2766 2705.2110 3057.6331

The matched peptides cover 11% (39/340 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


4. 6/25 matches (24%). 61906.0 Da, pI = 6.79. Acc. # O14531. HUMAN. DIHYDROPYRIMIDINASE RELATED PROTEIN-4 (DRP-4) (ULIP4 PROTEIN)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1434.78551434.768012.2021 459 471(K)(K)
1646.88071646.836526.8373 160 173(K)(C)
1994.04261993.882280.4494 174 189(R)CQCSDSQMYEIFSIIR(D)1Cys-am
2123.16342122.997578.1345 76 94(R)LQMPVLGMTPADDFCQGTK(A)1Cys-am
2272.23052272.059075.5100 369 390(K)(I)
2705.21102705.4231-78.4108 245 269(K)QANCPLYVTKVMSKGAADAIAQAKR(R)1Cys-am

19 unmatched masses: 1093.6256 1296.7378 1342.7740 1446.7813 1449.8578 1691.8947 1707.8665 1823.0009 1847.9841 1940.9959 2062.3329 2079.1645 2107.1306 2211.1639 2228.1056 2273.2038 2299.2215 2465.2766 3057.6331

The matched peptides cover 19% (109/572 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


5. 7/25 matches (28%). 86828.5 Da, pI = 6.47. Acc. # O08811. MOUSE. DNA-REPAIR PROTEIN COMPLEMENTING XP-D CELLS (XERODERMA PIGMENTOSUM GROUP D COMPLEMENTING PROTEIN) (DNA EXCISION REPAIR PROTEIN ERCC-2)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1342.77401342.8058-23.6968 217 228(K)(A)
1446.78131446.8684-60.2000 49 61(K)(A)
1707.86651707.9295-36.8578 635 647(K)(E)
1940.99591941.0380-21.7074 667 683(R)(F)
2062.33292062.192668.0792 632 647(R)(E)
2079.16452079.137812.8540 451 469(R)(I)
2705.21102705.2677-20.9578 134 156(K)CHSLTASYVRAQYQQDASLPHCR(F)1Cys-am

18 unmatched masses: 1093.6256 1296.7378 1434.7855 1449.8578 1646.8807 1691.8947 1823.0009 1847.9841 1994.0426 2107.1306 2123.1634 2211.1639 2228.1056 2272.2305 2273.2038 2299.2215 2465.2766 3057.6331

The matched peptides cover 13% (100/760 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


MS-Fit 3.1.1, ProteinProspector 3.2.1
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