MS-Fit Search Results


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Sample ID (comment): HSG029
Database searched: SwissProt.r36
Molecular weight search (1000 - 100000 Da) selects 69977 entries.
Full pI range: 74019 entries.
Species search ( HUMAN MOUSE ) selects 8141 entries.
Combined molecular weight, pI and species searches select 7373 entries.
MS-Fit search selects 215 entries (results displayed for top 5 matches).

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
4
Peptide Mass
Tolerance (+/-)
50.000 ppm
Peptide Masses
are
monoisotopic
Digest
Used
Trypsin
Max. # Missed
Cleavages
3
Cysteines
Modified by
unmodified
Peptide
N terminus
Hydrogen (H)
Peptide
C terminus
Free Acid (O H)
Input #
Peptide Masses
28

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesSwissProt.r36
Accession #
Protein Name
11.94e+0048/28 (28%) 35922.2 / 8.58HUMANGLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, LIVER (EC 1.2.1.12).
22596/28 (21%) 55770.9 / 6.74HUMANZINC FINGER PROTEIN 165.
32356/28 (21%) 37429.9 / 8.97HUMANHETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS A2/B1 (HNRNP A2 AND HNRNP B1).
41884/28 (14%) 35679.0 / 8.45MOUSEGLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (EC 1.2.1.12) (GAPDH).
51646/28 (21%) 81211.2 / 5.98MOUSEDNA REPLICATION LICENSING FACTOR MCM7 (CDC47 HOMOLOG).

Detailed Results


1. 8/28 matches (28%). 35922.2 Da, pI = 8.58. Acc. # P04406. HUMAN. GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, LIVER (EC 1.2.1.12)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
811.4509811.413645.9666 227 233(K)LTGMAFR(V)1Met-ox
1411.75581411.7909-24.8319 200 214(R)(A)
1544.83551544.810716.0708 234 247(R)VPTANVSVVDLTCR(L)1Cys-am
1613.90171613.90150.1403 66 79(K)(D)
1763.80571763.80291.5548 309 322(K)(V)
2211.11192211.2171-47.5596 234 253(R)VPTANVSVVDLTCRLEKPAK(Y)1Cys-am
2595.32732595.3605-12.7691 162 185(K)(T)
2611.31792611.3554-14.3742 162 185(K)VIHDNFGIVEGLMTTVHAITATQK(T)1Met-ox

20 unmatched masses: 806.4566 842.5539 1179.6274 1377.6457 1487.7826 1614.9171 1617.8617 1695.7675 1767.7657 1768.7024 1779.8274 1786.7511 1798.9134 1800.8584 1926.9691 1993.9524 1995.0228 2144.9505 2205.9443 2220.0734

The matched peptides cover 28% (94/334 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


2. 6/28 matches (21%). 55770.9 Da, pI = 6.74. Acc. # P49910. HUMAN. ZINC FINGER PROTEIN 165..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
811.4509811.4790-34.6029 439 445(R)(H)
1779.82741779.81586.4904 421 435(R)(T)
1779.82741779.779426.9343 449 463(R)IHTGEKPYECSECGR(A)1Cys-am
1786.75111786.8169-36.8145 212 228(R)(S)
1798.91341798.89848.3191 72 85(R)ELCCQWLKPEIHTK(E)1Cys-am
2220.07342220.007929.5388 446 463(R)HFRIHTGEKPYECSECGR(A)1Cys-am
2611.31792611.276115.9923 425 445(R)EKPYECSECGKTFRVSSHLIR(H)2Cys-am

22 unmatched masses: 806.4566 842.5539 1179.6274 1377.6457 1411.7558 1487.7826 1544.8355 1613.9017 1614.9171 1617.8617 1695.7675 1763.8057 1767.7657 1768.7024 1800.8584 1926.9691 1993.9524 1995.0228 2144.9505 2205.9443 2211.1119 2595.3273

The matched peptides cover 15% (74/485 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


3. 6/28 matches (21%). 37429.9 Da, pI = 8.97. Acc. # P22626. HUMAN. HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS A2/B1 (HNRNP A2 AND HNRNP B1)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1377.64571377.630011.3804 214 228(R)(G)
1695.76751695.76551.1791 154 168(R)(I)
1798.91341798.9227-5.1801 23 38(K)(N)
1926.96911927.0177-25.1900 22 38(R)(N)
2205.94432205.900819.7145 326 350(R)NMGGPYGGGNYGPGGSGGSGGYGGR(S)1Met-ox
2220.07342220.07121.0007 130 147(R)(Q)

22 unmatched masses: 806.4566 811.4509 842.5539 1179.6274 1411.7558 1487.7826 1544.8355 1613.9017 1614.9171 1617.8617 1763.8057 1767.7657 1768.7024 1779.8274 1786.7511 1800.8584 1993.9524 1995.0228 2144.9505 2211.1119 2595.3273 2611.3179

The matched peptides cover 25% (90/353 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


4. 4/28 matches (14%). 35679.0 Da, pI = 8.45. Acc. # P16858. MOUSE. GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (EC 1.2.1.12) (GAPDH)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
811.4509811.413645.9666 225 231(K)LTGMAFR(V)1Met-ox
1779.82741779.797816.5899 307 320(K)(V)
2595.32732595.3605-12.7691 160 183(K)(T)
2611.31792611.3554-14.3742 160 183(K)VIHDNFGIVEGLMTTVHAITATQK(T)1Met-ox

24 unmatched masses: 806.4566 842.5539 1179.6274 1377.6457 1411.7558 1487.7826 1544.8355 1613.9017 1614.9171 1617.8617 1695.7675 1763.8057 1767.7657 1768.7024 1786.7511 1798.9134 1800.8584 1926.9691 1993.9524 1995.0228 2144.9505 2205.9443 2211.1119 2220.0734

The matched peptides cover 13% (45/332 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


5. 6/28 matches (21%). 81211.2 Da, pI = 5.98. Acc. # Q61881. MOUSE. DNA REPLICATION LICENSING FACTOR MCM7 (CDC47 HOMOLOG)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1377.64571377.6949-35.7339 482 494(R)CSILAAANPAYGR(Y)1Cys-am
1487.78261487.8334-34.1711 654 666(R)(E)
1798.91341798.9373-13.2983 456 471(R)(A)
1800.85841800.9141-30.9192 546 560(R)(R)
1993.95241994.0051-26.4256 636 653(R)(T)
2211.11192211.1126-0.3087 16 32(K)(Y)

22 unmatched masses: 806.4566 811.4509 842.5539 1179.6274 1411.7558 1544.8355 1613.9017 1614.9171 1617.8617 1695.7675 1763.8057 1767.7657 1768.7024 1779.8274 1786.7511 1926.9691 1995.0228 2144.9505 2205.9443 2220.0734 2595.3273 2611.3179

The matched peptides cover 12% (92/719 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


MS-Fit 3.1.1, ProteinProspector 3.2.1
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