MS-Fit Search Results


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Sample ID (comment): HSG046
Database searched: SwissProt.r36
Molecular weight search (1000 - 100000 Da) selects 69977 entries.
Full pI range: 74019 entries.
Species search ( HUMAN MOUSE ) selects 8141 entries.
Combined molecular weight, pI and species searches select 7373 entries.
MS-Fit search selects 963 entries (results displayed for top 10 matches).

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
4
Peptide Mass
Tolerance (+/-)
50.000 ppm
Peptide Masses
are
monoisotopic
Digest
Used
Trypsin
Max. # Missed
Cleavages
5
Cysteines
Modified by
unmodified
Peptide
N terminus
Hydrogen (H)
Peptide
C terminus
Free Acid (O H)
Input #
Peptide Masses
60

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesSwissProt.r36
Accession #
Protein Name
11.27e+00513/60 (21%) 65886.8 / 8.16HUMANKERATIN, TYPE II CYTOSKELETAL 1 (CYTOKERATIN 1) (K1) (CK 1) (67 KD CYTOKERATIN) (HAIR ALPHA PROTEIN).
25.87e+00310/60 (16%) 61987.6 / 5.14HUMANKERATIN, TYPE I CYTOSKELETAL 9 (CYTOKERATIN 9) (K9) (CK 9).
31.65e+00310/60 (16%) 89614.6 / 8.61HUMANTUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3 (PUTATIVE DNA BINDING PROTEIN A20) (ZINC FINGER PROTEIN A20).
44097/60 (11%) 19329.7 / 11.65HUMANPRE-MRNA SPLICING FACTOR SRP20 (X16 PROTEIN).
53816/60 (10%) 74934.9 / 5.61MOUSEVITAMIN K-DEPENDENT PROTEIN S PRECURSOR.
632910/60 (16%) 79895.8 / 5.47MOUSECOMPLEMENT-ACTIVATING COMPONENT OF RA-REACTIVE FACTOR PRECURSOR (EC 3.4.21.-) (RA-REACTIVE FACTOR SERINE PROTEASE P100) (RARF).
71717/60 (11%) 54625.4 / 8.66HUMANT-CELL SURFACE GLYCOPROTEIN CD5 PRECURSOR (LYMPHOCYTE GLYCOPROTEIN T1/LEU-1) (LYMPHOCYTE ANTIGEN CD5).
81445/60 (8%) 51295.5 / 4.88HUMANGA BINDING PROTEIN ALPHA CHAIN (GABP-ALPHA SUBUNIT) (TRANSCRIPTION FACTOR E4TF1-60) (NUCLEAR RESPIRATORY FACTOR-2 SUBUNIT ALPHA).
91407/60 (11%) 39586.8 / 9.03MOUSEWNT-6 PROTEIN PRECURSOR.
101379/60 (15%) 84543.1 / 8.41HUMANALPHA-1,3(6)-MANNOSYLGLYCOPROTEIN BETA-1,6-N-ACETYL- GLUCOSAMINYLTRANSFERASE V (EC 2.4.1.155) (ALPHA-MANNOSIDE BETA-1,6-N- ACETYLGLUCOSAMINYLTRANSFERASE) (N-ACETYLGLUCOSAMINYL-TRANSFERASE V) (GNT-V) (GLCNAC-T V).

Detailed Results


1. 13/60 matches (21%). 65886.8 Da, pI = 8.16. Acc. # P04264. HUMAN. KERATIN, TYPE II CYTOSKELETAL 1 (CYTOKERATIN 1) (K1) (CK 1) (67 KD CYTOKERATIN) (HAIR ALPHA PROTEIN)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1179.61271179.60109.9472 376 385(K)(H)
1277.72071277.71057.9660 472 482(K)(T)
1300.54801300.530213.6876 257 266(K)(N)
1302.68441302.7157-24.0411 343 354(R)(A)
1302.68441302.7018-13.3569 392 402(R)(V)
1383.70811383.690912.4891 185 196(K)(V)
1475.77081475.7858-10.1878 199 210(R)(W)
1475.77081475.749414.4676 211 222(K)(T)
1487.74151487.8043-42.1675 239 250(R)(L)
1638.86371638.86042.0313 185 198(K)(F)
1716.84751716.8517-2.4049 417 431(K)(G)
1993.98141993.97722.0914 223 238(R)(R)
2150.05582150.0783-10.4502 223 239(R)(R)
2184.10052184.1260-11.6879 441 459(K)(L)
2383.94942383.9524-1.2507 518 548(R)(G)

47 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 853.4455 1036.5390 1043.5394 1060.5548 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1235.6026 1307.6912 1493.7508 1550.7641 1621.7660 1707.7645 1719.7987 1785.8913 1791.7179 1798.9004 1837.9282 1851.9104 1876.9499 1927.0072 1940.9533 2008.9866 2211.1012 2284.1641 2320.0911 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 28% (185/643 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


2. 10/60 matches (16%). 61987.6 Da, pI = 5.14. Acc. # P35527. HUMAN. KERATIN, TYPE I CYTOSKELETAL 9 (CYTOKERATIN 9) (K9) (CK 9)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1060.55481060.5639-8.5195 224 232(K)(M)
1065.51831065.499917.3290 154 162(K)(L)
1157.59591157.59153.8431 250 260(R)(Q)
1307.69121307.67829.9583 240 249(R)(Q)
1791.71791791.7283-5.7900 490 512(R)(G)
1837.92821837.9660-20.5642 374 389(R)(K)
1851.91041851.9275-9.2187 321 335(K)(N)
2510.14132510.13233.5651 449 471(K)(I)
2705.15642705.1617-1.9630 63 94(R)(G)
3264.50183264.5144-3.8492 339 367(K)(E)

50 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 853.4455 1036.5390 1043.5394 1090.5418 1109.4973 1123.5808 1179.6127 1235.6026 1277.7207 1300.5480 1302.6844 1383.7081 1475.7708 1487.7415 1493.7508 1550.7641 1621.7660 1638.8637 1707.7645 1716.8475 1719.7987 1785.8913 1798.9004 1876.9499 1927.0072 1940.9533 1993.9814 2008.9866 2150.0558 2184.1005 2211.1012 2284.1641 2320.0911 2383.9494 2717.0873

The matched peptides cover 28% (177/622 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


3. 10/60 matches (16%). 89614.6 Da, pI = 8.61. Acc. # P21580. HUMAN. TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3 (PUTATIVE DNA BINDING PROTEIN A20) (ZINC FINGER PROTEIN A20)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
717.3895717.3895-0.0318 644 650(K)(F)
1036.53901036.495142.3705 750 759(R)(Q)
1179.61271179.558146.3262 677 685(K)CFIEAQNQR(F)1Cys-am
1493.75081493.692139.3138 622 632(K)GFCTLCFIEYR(E)2Cys-am
1550.76411550.7718-4.9288 716 728(K)CARASCKNILACR(S)2Cys-am
1621.76601621.8089-26.4354 716 728(K)CARASCKNILACR(S)3Cys-am
1716.84751716.826712.1389 288 301(K)(L)
1851.91041851.9751-34.9309 421 439(K)(G)
1876.94991876.924113.7413 677 691(K)(T)
1993.98141994.0500-34.4027 25 41(R)(T)

50 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 842.5204 853.4455 1043.5394 1060.5548 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1235.6026 1277.7207 1300.5480 1302.6844 1307.6912 1383.7081 1475.7708 1487.7415 1638.8637 1707.7645 1719.7987 1785.8913 1791.7179 1798.9004 1837.9282 1927.0072 1940.9533 2008.9866 2150.0558 2184.1005 2211.1012 2284.1641 2320.0911 2383.9494 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 13% (106/790 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


4. 7/60 matches (11%). 19329.7 Da, pI = 11.65. Acc. # P23152. HUMAN. PRE-MRNA SPLICING FACTOR SRP20 (X16 PROTEIN)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
717.3895717.4048-21.2975 38 43(R)(N)
853.4455853.432115.6916 91 98(R)(R)
1043.53941043.53147.6384 29 37(R)(S)
1123.58081123.57614.2063 89 98(R)(R)
1621.76601621.76510.5793 44 57(R)(D)
1876.94991876.9517-0.9927 12 28(K)(A)
2320.09112320.1515-26.0163 38 57(R)(D)
2320.09112320.0998-3.7585 44 64(R)(E)

53 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 842.5204 1036.5390 1060.5548 1065.5183 1090.5418 1109.4973 1157.5959 1179.6127 1235.6026 1277.7207 1300.5480 1302.6844 1307.6912 1383.7081 1475.7708 1487.7415 1493.7508 1550.7641 1638.8637 1707.7645 1716.8475 1719.7987 1785.8913 1791.7179 1798.9004 1837.9282 1851.9104 1927.0072 1940.9533 1993.9814 2008.9866 2150.0558 2184.1005 2211.1012 2284.1641 2383.9494 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 38% (63/164 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


5. 6/60 matches (10%). 74934.9 Da, pI = 5.61. Acc. # Q08761. MOUSE. VITAMIN K-DEPENDENT PROTEIN S PRECURSOR..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1060.55481060.525028.1488 474 481(K)HCFLNVEK(G)1Cys-am
1638.86371638.8743-6.4616 410 424(K)(I)
1707.76451707.7682-2.1423 57 69(R)ECIEELCNKEEAR(E)2Cys-am
1719.79871719.8587-34.8750 561 575(R)LEAVSLCSDQQSQLK(C)1Cys-am
1851.91041851.865524.2643 201 218(K)(N)
1993.98141993.939720.9017 201 218(K)DLDECALKPSVCGTAVCK(N)2Cys-am

54 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 853.4455 1036.5390 1043.5394 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1179.6127 1235.6026 1277.7207 1300.5480 1302.6844 1307.6912 1383.7081 1475.7708 1487.7415 1493.7508 1550.7641 1621.7660 1716.8475 1785.8913 1791.7179 1798.9004 1837.9282 1876.9499 1927.0072 1940.9533 2008.9866 2150.0558 2184.1005 2211.1012 2284.1641 2320.0911 2383.9494 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 10% (69/675 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


6. 10/60 matches (16%). 79895.8 Da, pI = 5.47. Acc. # P98064. MOUSE. COMPLEMENT-ACTIVATING COMPONENT OF RA-REACTIVE FACTOR PRECURSOR (EC 3.4.21.-) (RA-REACTIVE FACTOR SERINE PROTEASE P100) (RARF)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
717.3895717.368429.4223 694 698(K)(I)
853.4455853.44204.0959 389 395(R)(S)
1043.53941043.5559-15.8394 369 379(K)(H)
1235.60261235.6173-11.8572 175 184(R)(T)
1707.76451707.8389-43.5615 294 308(R)(L)
1837.92821837.9516-12.7363 628 644(K)KKVTKDMICAGEKEGGK(D)1Met-ox
1851.91041851.9717-33.1109 380 395(K)(S)
1940.95331940.885335.0360 663 679(R)(K)
2284.16412284.15603.5414 526 542(K)(T)
2320.09112320.001438.6517 133 151(R)FTGFDAHYMAVDVDECKER(E)1Met-ox 1Cys-am

50 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 842.5204 1036.5390 1060.5548 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1179.6127 1277.7207 1300.5480 1302.6844 1307.6912 1383.7081 1475.7708 1487.7415 1493.7508 1550.7641 1621.7660 1638.8637 1716.8475 1719.7987 1785.8913 1791.7179 1798.9004 1876.9499 1927.0072 1993.9814 2008.9866 2150.0558 2184.1005 2211.1012 2383.9494 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 18% (127/704 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


7. 7/60 matches (11%). 54625.4 Da, pI = 8.66. Acc. # P06127. HUMAN. T-CELL SURFACE GLYCOPROTEIN CD5 PRECURSOR (LYMPHOCYTE GLYCOPROTEIN T1/LEU-1) (LYMPHOCYTE ANTIGEN CD5)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1300.54801300.6108-48.3100 347 356(K)(N)
1550.76411550.702239.9647 293 307(R)(S)
1621.76601621.739316.4906 293 307(R)QGAQWAALCDSSSAR(S)1Cys-am
1940.95331940.9653-6.1726 329 346(R)(L)
1993.98141993.951415.0326 293 311(R)(W)
2184.10052184.08387.6604 26 43(R)(C)
2211.10122211.059219.0135 339 356(R)(N)

53 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 853.4455 1036.5390 1043.5394 1060.5548 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1179.6127 1235.6026 1277.7207 1302.6844 1307.6912 1383.7081 1475.7708 1487.7415 1493.7508 1638.8637 1707.7645 1716.8475 1719.7987 1785.8913 1791.7179 1798.9004 1837.9282 1851.9104 1876.9499 1927.0072 2008.9866 2150.0558 2284.1641 2320.0911 2383.9494 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 13% (65/495 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


8. 5/60 matches (8%). 51295.5 Da, pI = 4.88. Acc. # Q06546. HUMAN. GA BINDING PROTEIN ALPHA CHAIN (GABP-ALPHA SUBUNIT) (TRANSCRIPTION FACTOR E4TF1-60) (NUCLEAR RESPIRATORY FACTOR-2 SUBUNIT ALPHA)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1036.53901036.521616.8133 166 174(R)(K)
1307.69121307.6959-3.6219 405 416(K)(L)
1383.70811383.7457-27.1354 296 307(K)(S)
1716.84751716.84044.1382 151 165(K)(W)
2510.14132510.2019-24.1685 59 79(R)LQCSLDAHEICLQDIQLDPER(S)1Cys-am

55 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 853.4455 1043.5394 1060.5548 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1179.6127 1235.6026 1277.7207 1300.5480 1302.6844 1475.7708 1487.7415 1493.7508 1550.7641 1621.7660 1638.8637 1707.7645 1719.7987 1785.8913 1791.7179 1798.9004 1837.9282 1851.9104 1876.9499 1927.0072 1940.9533 1993.9814 2008.9866 2150.0558 2184.1005 2211.1012 2284.1641 2320.0911 2383.9494 2705.1564 2717.0873 3264.5018

The matched peptides cover 15% (69/454 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


9. 7/60 matches (11%). 39586.8 Da, pI = 9.03. Acc. # P22727. MOUSE. WNT-6 PROTEIN PRECURSOR..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1302.68441302.7282-33.6904 92 102(K)(E)
1487.74151487.73305.7226 74 83(R)ECQFQFRFRR(W)1Cys-am
1550.76411550.694345.0352 330 342(R)(F)
1621.76601621.731421.3389 330 342(R)QESVQLEENCLCR(F)1Cys-am
1927.00721926.959524.7490 50 66(R)QAELCQAEPEVVAELAR(G)1Cys-am
2211.10122211.1192-8.1304 50 69(R)QAELCQAEPEVVAELARGAR(L)1Cys-am
3264.50183264.5539-15.9365 219 248(R)(L)

53 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 853.4455 1036.5390 1043.5394 1060.5548 1065.5183 1090.5418 1109.4973 1123.5808 1157.5959 1179.6127 1235.6026 1277.7207 1300.5480 1307.6912 1383.7081 1475.7708 1493.7508 1638.8637 1707.7645 1716.8475 1719.7987 1785.8913 1791.7179 1798.9004 1837.9282 1851.9104 1876.9499 1940.9533 1993.9814 2008.9866 2150.0558 2184.1005 2284.1641 2320.0911 2383.9494 2510.1413 2705.1564 2717.0873

The matched peptides cover 23% (84/364 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


10. 9/60 matches (15%). 84543.1 Da, pI = 8.41. Acc. # Q09328. HUMAN. ALPHA-1,3(6)-MANNOSYLGLYCOPROTEIN BETA-1,6-N-ACETYL- GLUCOSAMINYLTRANSFERASE V (EC 2.4.1.155) (ALPHA-MANNOSIDE BETA-1,6-N- ACETYLGLUCOSAMINYLTRANSFERASE) (N-ACETYLGLUCOSAMINYL-TRANSFERASE V) (GNT-V) (GLCNAC-T V)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
853.4455853.4644-22.2283 493 500(K)(D)
1036.53901036.5427-3.5716 446 454(R)(V)
1065.51831065.5250-6.2768 679 688(K)(D)
1302.68441302.6993-11.4359 244 254(R)(S)
1475.77081475.733025.5952 232 241(K)HEEFRWMRLR(I)1Met-ox
1487.74151487.73891.7748 331 344(K)VVGNRSGCPTVGDR(I)1Cys-am
1798.90041798.9128-6.8861 446 460(R)(N)
1940.95331940.9792-13.3436 67 84(R)(T)
2184.10052184.073412.4061 623 641(K)(L)

51 unmatched masses: 520.1705 523.1284 524.1596 527.1959 541.2117 543.1769 547.2242 550.1374 568.1341 587.1437 588.2399 599.3728 714.2560 717.3895 842.5204 1043.5394 1060.5548 1090.5418 1109.4973 1123.5808 1157.5959 1179.6127 1235.6026 1277.7207 1300.5480 1307.6912 1383.7081 1493.7508 1550.7641 1621.7660 1638.8637 1707.7645 1716.8475 1719.7987 1785.8913 1791.7179 1837.9282 1851.9104 1876.9499 1927.0072 1993.9814 2008.9866 2150.0558 2211.1012 2284.1641 2320.0911 2383.9494 2510.1413 2705.1564 2717.0873 3264.5018

The matched peptides cover 14% (105/741 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


MS-Fit 3.1.1, ProteinProspector 3.2.1
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