MS-Fit Search Results


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Sample ID (comment): HSG303
Database searched: SwissProt.8.28.2000
Molecular weight search (1000 - 100000 Da) selects 83787 entries.
Full pI range: 88628 entries.
Species search ( HUMAN MOUSE ) selects 9907 entries.
Combined molecular weight, pI and species searches select 8922 entries.
Pre searches select 8922 entries.
MS-Fit search selects 876 entries (results displayed for top 5 matches).

Parameters Used in Search

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
Peptide Mass
Tolerance (+/-)
Peptide Masses
are
Digest
Used
Max. # Missed
Cleavages
Cysteines
Modified by
Peptide
N terminus
Peptide
C terminus
4 60.000 ppm monoisotopic Trypsin 4 unmodified Hydrogen (H) Free Acid (O H)

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesAccession #Protein Name
17.93e+00718/40 (45%) 38604.4 / 7.58HUMANANNEXIN II (LIPOCORTIN II) (CALPACTIN I HEAVY CHAIN) (CHROMOBINDIN 8) (P36) (PROTEIN I) (PLACENTAL ANTICOAGULANT PROTEIN IV) (PAP-IV)
21.8e+00512/40 (30%) 38676.5 / 7.55MOUSEANNEXIN II (LIPOCORTIN II) (CALPACTIN I HEAVY CHAIN) (CHROMOBINDIN 8) (P36) (PROTEIN I) (PLACENTAL ANTICOAGULANT PROTEIN IV) (PAP-IV)
32008/40 (20%) 89503.9 / 7.95MOUSESEMAPHORIN 3E PRECURSOR (SEMAPHORIN H) (SEMA H)
41824/40 (10%) 33375.0 / 7.18HUMANPYRROLINE-5-CARBOXYLATE REDUCTASE (P5CR) (P5C REDUCTASE)
51356/40 (15%) 59636.7 / 7.98HUMANCORONIN 2A (WD-REPEAT PROTEIN 2) (IR10)

Detailed Results

1. 18/40 matches (45%). 38604.4 Da, pI = 7.58. Acc. # P07355. HUMAN. ANNEXIN II (LIPOCORTIN II) (CALPACTIN I HEAVY CHAIN) (CHROMOBINDIN 8) (P36) (PROTEIN I) (PLACENTAL ANTICOAGULANT PROTEIN IV) (PAP-IV).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
880.4944880.441659.9816 197 204(R)(R)
1035.58651035.529754.8268 213 220(K)(S)
1051.56111051.524634.6460 213 220(K)WISIMTER(S)1Met-ox
1086.54291086.485652.7556 29 37(K)(D)
1111.61071111.553651.3031 69 77(R)(R)
1142.63121142.588037.8173 1 10(-)STVHEILCK(L)1Cys-am Acet N
1142.63121142.6322-0.9088 305 313(R)(S)
1222.63671222.595633.6218 105 115(K)(A)
1225.62781225.570147.0640 158 168(K)(K)
1244.68851244.623552.2204 136 145(R)(V)
1421.74211421.695332.9520 314 324(K)(G)
1460.73961460.673245.5211 234 245(K)(K)
1476.73711476.668146.7781 234 245(K)SYSPYDMLESIR(K)1Met-ox
1542.93361542.849154.7648 50 63(K)(S)
1791.92621791.879925.8896 120 135(K)GLGTDEDSLIEIICSR(T)1Cys-am
1844.95871844.903030.1988 11 28(K)(A)
1908.96221908.882741.6539 180 196(R)(D)
2065.08912064.983850.9783 179 196(R)(D)
2384.12002384.2098-37.6531 29 49(K)(G)

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Click individual mass to do a non-specific cleavage search.

The matched peptides cover 54% (186/339AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 45.0 Mean Error = 37.6006 ppm Data Tolerance = 46.0425 ppm Mean Missed Cleavages = 0.3

2. 12/40 matches (30%). 38676.5 Da, pI = 7.55. Acc. # P07356. MOUSE. ANNEXIN II (LIPOCORTIN II) (CALPACTIN I HEAVY CHAIN) (CHROMOBINDIN 8) (P36) (PROTEIN I) (PLACENTAL ANTICOAGULANT PROTEIN IV) (PAP-IV).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1035.58651035.529754.8268 213 220(K)(S)
1051.56111051.524634.6460 213 220(K)WISIMTER(S)1Met-ox
1111.61071111.553651.3031 69 77(R)(R)
1142.63121142.588037.8173 1 10(-)STVHEILCK(L)1Cys-am Acet N
1142.63121142.6322-0.9088 305 313(R)(S)
1222.63671222.595633.6218 105 115(K)(A)
1225.62781225.570147.0640 158 168(K)(K)
1244.68851244.623552.2204 136 145(R)(V)
1421.74211421.695332.9520 314 324(K)(G)
1542.93361542.849154.7648 50 63(K)(S)
1791.92621791.879925.8896 120 135(K)GLGTDEDSLIEIICSR(T)1Cys-am
1908.96221908.882741.6539 180 196(R)(E)
2065.08912064.983850.9783 179 196(R)(E)

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Click individual mass to do a non-specific cleavage search.

The matched peptides cover 37% (127/339AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 30.0 Mean Error = 39.7561 ppm Data Tolerance = 31.0040 ppm Mean Missed Cleavages = 0.3

3. 8/40 matches (20%). 89503.9 Da, pI = 7.95. Acc. # P70275. MOUSE. SEMAPHORIN 3E PRECURSOR (SEMAPHORIN H) (SEMA H).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1035.58651035.541043.9783 732 739(K)(K)
1111.61071111.557048.2705 199 208(R)(L)
1133.56711133.538025.7259 351 360(R)(E)
1459.74061459.693832.0285 338 350(R)(E)
1791.92621791.9982-40.1593 761 775(R)(-)
1866.93681866.92715.1526 589 605(R)(S)
2211.21552211.119443.4745 92 110(R)(D)
2233.14422233.020955.2186 565 584(R)HGNAAQQCFGQQFVGDALDR(T)1Cys-am

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Click individual mass to do a non-specific cleavage search.

The matched peptides cover 14% (112/775AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 20.0 Mean Error = 26.7112 ppm Data Tolerance = 62.4377 ppm Mean Missed Cleavages = 1.0

4. 4/40 matches (10%). 33375.0 Da, pI = 7.18. Acc. # P32322. HUMAN. PYRROLINE-5-CARBOXYLATE REDUCTASE (P5CR) (P5C REDUCTASE).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1142.63121142.6322-0.9088 18 29(K)(I)
1142.63121142.6798-42.5818 107 116(K)(V)
1459.74061459.7943-36.7680 252 264(R)SLLINAVEASCIR(T)1Cys-am
1538.84701538.781542.6133 292 307(K)(L)
1844.95871844.906428.3716 267 283(R)(K)

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Click individual mass to do a non-specific cleavage search.

The matched peptides cover 21% (68/319AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 10.0 Mean Error = -1.8548 ppm Data Tolerance = 75.9577 ppm Mean Missed Cleavages = 0.2

5. 6/40 matches (15%). 59636.7 Da, pI = 7.98. Acc. # Q92828. HUMAN. CORONIN 2A (WD-REPEAT PROTEIN 2) (IR10).
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1063.56201063.520638.9432 517 525(K)NLRMGSEQL(-)1Met-ox
1225.62781225.588731.8650 329 339(R)(F)
1421.74211421.711221.7387 71 82(K)(G)
1443.75041443.694238.9145 479 489(K)(Q)
1459.74061459.689135.2541 479 489(K)TENELLQMFYR(Q)1Met-ox
2234.20172234.077055.8487 297 314(R)(S)

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Click individual mass to do a non-specific cleavage search.

The matched peptides cover 11% (61/525AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):

Percent TIC = 15.0 Mean Error = 37.0940 ppm Data Tolerance = 22.3604 ppm Mean Missed Cleavages = 0.3


MS-Fit 3.3.1, ProteinProspector 3.4.1
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