MS-Fit Search Results


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Sample ID (comment): HSG307
Database searched: SwissProt.r36
Molecular weight search (1000 - 100000 Da) selects 69977 entries.
Full pI range: 74019 entries.
Species search ( HUMAN MOUSE ) selects 8141 entries.
Combined molecular weight, pI and species searches select 7373 entries.
MS-Fit search selects 105 entries (results displayed for top 5 matches).

Considered modifications: | Oxidation of M | Protein N-terminus Acetylated | Acrylamide Modified Cys |
Min. # Peptides
to Match
4
Peptide Mass
Tolerance (+/-)
50.000 ppm
Peptide Masses
are
monoisotopic
Digest
Used
Trypsin
Max. # Missed
Cleavages
4
Cysteines
Modified by
unmodified
Peptide
N terminus
Hydrogen (H)
Peptide
C terminus
Free Acid (O H)
Input #
Peptide Masses
23

Result Summary

RankMOWSE
Score
# (%)
Masses
Matched
Protein
MW (Da)/pI
SpeciesSwissProt.r36
Accession #
Protein Name
18.03e+0049/23 (39%) 35922.2 / 8.58HUMANGLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, LIVER (EC 1.2.1.12).
21.54e+0036/23 (26%) 35679.0 / 8.45MOUSEGLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (EC 1.2.1.12) (GAPDH).
31435/23 (21%) 40297.8 / 9.18HUMANZINC FINGER PROTEIN 134.
491.45/23 (21%) 51599.1 / 8.11MOUSENEURTURIN RECEPTOR ALPHA PRECURSOR (NTNR-ALPHA) (NRTNR-ALPHA) (TGF- BETA RELATED NEUROTROPHIC FACTOR RECEPTOR 2) (GDNF RECEPTOR BETA) (GDNFR-BETA).
548.15/23 (21%) 55249.8 / 9.43HUMANZINC FINGER PROTEIN 141.

Detailed Results


1. 9/23 matches (39%). 35922.2 Da, pI = 8.58. Acc. # P04406. HUMAN. GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, LIVER (EC 1.2.1.12)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
795.4505795.418739.9633 227 233(K)(V)
805.4601805.432134.8529 5 12(K)(I)
811.4436811.413636.9601 227 233(K)LTGMAFR(V)1Met-ox
1544.85011544.810725.5309 234 247(R)VPTANVSVVDLTCR(L)1Cys-am
1613.94311613.901525.7739 66 79(K)(D)
1763.87891763.802943.0623 309 322(K)(V)
2277.09992277.038526.9262 86 106(K)(A)
2595.40272595.360516.2650 162 185(K)(T)
2611.39372611.355414.6483 162 185(K)VIHDNFGIVEGLMTTVHAITATQK(T)1Met-ox

14 unmatched masses: 806.4534 1433.8170 1614.9408 1617.8942 1718.8419 1746.7780 1761.8251 1765.8347 1767.7799 1769.6960 1779.7983 1785.7918 1791.8144 1795.7990

The matched peptides cover 30% (102/334 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


2. 6/23 matches (26%). 35679.0 Da, pI = 8.45. Acc. # P16858. MOUSE. GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (EC 1.2.1.12) (GAPDH)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
795.4505795.418739.9633 225 231(K)(V)
805.4601805.432134.8529 3 10(K)(I)
811.4436811.413636.9601 225 231(K)LTGMAFR(V)1Met-ox
1779.79831779.79780.2544 307 320(K)(V)
2595.40272595.360516.2650 160 183(K)(T)
2611.39372611.355414.6483 160 183(K)VIHDNFGIVEGLMTTVHAITATQK(T)1Met-ox

17 unmatched masses: 806.4534 1433.8170 1544.8501 1613.9431 1614.9408 1617.8942 1718.8419 1746.7780 1761.8251 1763.8789 1765.8347 1767.7799 1769.6960 1785.7918 1791.8144 1795.7990 2277.0999

The matched peptides cover 15% (53/332 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


3. 5/23 matches (21%). 40297.8 Da, pI = 9.18. Acc. # P52741. HUMAN. ZINC FINGER PROTEIN 134..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1614.94081614.886933.3884 245 257(K)(I)
1718.84191718.8471-3.0078 286 300(R)VHTGERPFVCSKCGK(D)1Cys-am
1765.83471765.763840.1612 314 328(R)VHTGERPYECSECGK(A)1Cys-am
1779.79831779.779410.5986 146 160(R)IHTGERPYECSECGK(T)1Cys-am
1791.81441791.8410-14.7990 258 272(R)IHTESKPFECIECGK(F)1Cys-am

18 unmatched masses: 795.4505 805.4601 806.4534 811.4436 1433.8170 1544.8501 1613.9431 1617.8942 1746.7780 1761.8251 1763.8789 1767.7799 1769.6960 1785.7918 1795.7990 2277.0999 2595.4027 2611.3937

The matched peptides cover 20% (73/348 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


4. 5/23 matches (21%). 51599.1 Da, pI = 8.11. Acc. # O08842. MOUSE. NEURTURIN RECEPTOR ALPHA PRECURSOR (NTNR-ALPHA) (NRTNR-ALPHA) (TGF- BETA RELATED NEUROTROPHIC FACTOR RECEPTOR 2) (GDNF RECEPTOR BETA) (GDNFR-BETA)..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1617.89421617.820545.5528 247 259(K)EKPNCLDLRSLCR(T)1Cys-am
1746.77801746.707240.5633 219 232(R)MLFCSCQDQACAER(R)2Cys-am
1761.82511761.8852-34.1341 62 76(R)QCLAGRDRNTMLANK(E)1Cys-am
1763.87891763.838722.8024 350 366(R)(G)
1779.79831779.8336-19.8226 350 366(R)NAIQAFGNGTDVNMSPK(G)1Met-ox

18 unmatched masses: 795.4505 805.4601 806.4534 811.4436 1433.8170 1544.8501 1613.9431 1614.9408 1718.8419 1765.8347 1767.7799 1769.6960 1785.7918 1791.8144 1795.7990 2277.0999 2595.4027 2611.3937

The matched peptides cover 12% (59/463 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


5. 5/23 matches (21%). 55249.8 Da, pI = 9.43. Acc. # Q15928. HUMAN. ZINC FINGER PROTEIN 141..
m/z
submitted
MH+
matched
Delta
ppm
startendPeptide Sequence
(Click for Fragment Ions)
Modifications
1433.81701433.790518.4878 431 442(K)(K)
1763.87891763.809739.2399 191 206(K)(A)
1765.83471765.788925.9165 332 346(R)IHTGEKPYTCEECGK(A)1Cys-am
2277.09992277.1708-31.1776 273 290(K)HKRIHAGEKPITCEECRK(I)2Cys-am
2595.40272595.4272-9.4401 375 396(K)(C)

18 unmatched masses: 795.4505 805.4601 806.4534 811.4436 1544.8501 1613.9431 1614.9408 1617.8942 1718.8419 1746.7780 1761.8251 1767.7799 1769.6960 1779.7983 1785.7918 1791.8144 1795.7990 2611.3937

The matched peptides cover 17% (83/474 AA's) of the protein.
Coverage Map for This Hit (MS-Digest index #):


MS-Fit 3.1.1, ProteinProspector 3.2.1
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