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NiceProt View of Swiss-Prot: P00367

[General] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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General information about the entry
Entry name DHE3_HUMAN
Primary accession number P00367
Secondary accession numbers None
Entered in Swiss-Prot in Release 01, July 1986
Sequence was last modified in Release 13, January 1990
Annotations were last modified in    Release 41, February 2003
Name and origin of the protein
Protein name Glutamate dehydrogenase 1, mitochondrial [Precursor]
Synonyms EC 1.4.1.3
GDH
Gene name
GLUD1 or GLUD
From
Homo sapiens (Human) [TaxID: 9606]
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo.
References
[1]
SEQUENCE FROM NUCLEIC ACID.
TISSUE=Liver;
MEDLINE=88240360; PubMed=3377777; [NCBI, ExPASy, EBI, Israel, Japan]
Amuro N., Yamaura M., Goto Y., Okazaki T.;
"Molecular cloning and nucleotide sequence of the cDNA for human liver glutamate dehydrogenase precursor.";
Biochem. Biophys. Res. Commun. 152:1395-1400(1988).
[2]
SEQUENCE FROM NUCLEIC ACID.
TISSUE=Liver;
MEDLINE=88217927; PubMed=3368458; [NCBI, ExPASy, EBI, Israel, Japan]
Mavrothalassitis G., Tzimagiorgis G., Mitsialis A., Zannis V., Plaitakis A., Papamatheakis J., Moschonas N.;
"Isolation and characterization of cDNA clones encoding human liver glutamate dehydrogenase: evidence for a small gene family.";
Proc. Natl. Acad. Sci. U.S.A. 85:3494-3498(1988).
[3]
SEQUENCE FROM NUCLEIC ACID.
MEDLINE=88289377; PubMed=3399399; [NCBI, ExPASy, EBI, Israel, Japan]
Nakatani Y., Schneider M.E., Banner C., Freese E.;
"Complete nucleotide sequence of human glutamate dehydrogenase cDNA.";
Nucleic Acids Res. 16:6237-6237(1988).
[4]
SEQUENCE FROM NUCLEIC ACID.
TISSUE=Brain, and Liver;
MEDLINE=88106451; PubMed=3426581; [NCBI, ExPASy, EBI, Israel, Japan]
Nakatani Y., Banner C., von Herrat M., Schneider M.E., Smith H.H., Freese E.;
"Comparison of human brain and liver glutamate dehydrogenase cDNAS.";
Biochem. Biophys. Res. Commun. 149:405-410(1987).
[5]
SEQUENCE FROM NUCLEIC ACID.
TISSUE=Placenta;
MEDLINE=93252371; PubMed=8486350; [NCBI, ExPASy, EBI, Israel, Japan]
Michaelidis T.M., Tzimagiorgis G., Moschonas N.K., Papamatheakis J.;
"The human glutamate dehydrogenase gene family: gene organization and structural characterization.";
Genomics 16:150-160(1993).
[6]
SEQUENCE OF 301-558 FROM NUCLEIC ACID.
TISSUE=Brain;
MEDLINE=87224937; PubMed=3585334; [NCBI, ExPASy, EBI, Israel, Japan]
Banner C., Silverman S., Thomas J.W., Lampel K.A., Vitkovic L., Huie D., Wenthold R.J.;
"Isolation of a human brain cDNA for glutamate dehydrogenase.";
J. Neurochem. 49:246-252(1987).
[7]
SEQUENCE OF 540-558 FROM NUCLEIC ACID.
MEDLINE=93300479; PubMed=8314555; [NCBI, ExPASy, EBI, Israel, Japan]
Tzimagiorgis G., Leversha M.A., Chroniary K., Goulielmos G., Sargent C.A., Ferguson-Smith M., Moschonas N.K.;
"Structure and expression analysis of a member of the human glutamate dehydrogenase (GLUD) gene family mapped to chromosome 10p11.2.";
Hum. Genet. 91:433-438(1993).
[8]
SEQUENCE OF 54-558.
TISSUE=Liver;
MEDLINE=79151102; PubMed=429360; [NCBI, ExPASy, EBI, Israel, Japan]
Julliard J.H., Smith E.L.;
"Partial amino acid sequence of the glutamate dehydrogenase of human liver and a revision of the sequence of the bovine enzyme.";
J. Biol. Chem. 254:3427-3438(1979).
[9]
SEQUENCE OF 54-69.
TISSUE=Liver;
MEDLINE=93162045; PubMed=1286669; [NCBI, ExPASy, EBI, Israel, Japan]
Hochstrasser D.F., Frutiger S., Paquet N., Bairoch A., Ravier F., Pasquali C., Sanchez J.-C., Tissot J.-D., Bjellqvist B., Vargas R., Appel R.D., Hughes G.J.;
"Human liver protein map: a reference database established by microsequencing and gel comparison.";
Electrophoresis 13:992-1001(1992).
[10]
SUBSTRATE-BINDING SITE.
MEDLINE=74125870; PubMed=4856315; [NCBI, ExPASy, EBI, Israel, Japan]
Rasched I., Joernvall H., Sund H.;
"Studies of glutamate dehydrogenase. Identification of an amino group involved in the substrate binding.";
Eur. J. Biochem. 41:603-606(1974).
[11]
REVIEW ON VARIANTS.
MEDLINE=99268411; PubMed=10338089; [NCBI, ExPASy, EBI, Israel, Japan]
Meissner T., Beinbrech B., Mayatepek E.;
"Congenital hyperinsulinism: molecular basis of a heterogeneous disease.";
Hum. Mutat. 13:351-361(1999).
[12]
VARIANTS HHS LEU-498; SER-499; ASP-499; PRO-501 AND TYR-507.
MEDLINE=98223108; PubMed=9571255; [NCBI, ExPASy, EBI, Israel, Japan]
Stanley C.A., Lieu Y.K., Hsu B.Y.L., Burlina A.B., Greenberg C.R., Hopwood N.J., Perlman K., Rich B.H., Zammarchi E., Poncz M.;
"Hyperinsulinism and hyperammonemia in infants with regulatory mutations of the glutamate dehydrogenase gene.";
New Engl. J. Med. 338:1352-1357(1998).
[13]
VARIANTS HHS LYS-318 AND ALA-349.
MEDLINE=20102775; PubMed=10636977; [NCBI, ExPASy, EBI, Israel, Japan]
Miki Y., Taki T., Ohura T., Kato H., Yanagisawa M., Hayashi Y.;
"Novel missense mutations in the glutamate dehydrogenase gene in the congenital hyperinsulinism-hyperammonemia syndrome.";
J. Pediatr. 136:69-72(2000).
Comments
  • CATALYTIC ACTIVITY: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H.
  • SUBUNIT: Homohexamer.
  • SUBCELLULAR LOCATION: Mitochondrial matrix.
  • DISEASE: OVERACTIVITY OF GLUD1 IS ASSOCIATED WITH THE HYPERINSULINISM-HYPERAMMONEMIA SYNDROME (HHS). ELEVATED OXIDATION RATE OF GLUTAMATE TO ALPHA-KETOGLUTARATE STIMULATES INSULIN SECRETION IN THE PANCREATIC BETA CELLS, WHILE THEY IMPAIRE DETOXIFICATION OF AMMONIUM IN THE LIVER.
  • SIMILARITY: BELONGS TO THE GLU/LEU/PHE/VAL DEHYDROGENASES FAMILY.
Copyright
This SWISS-PROT entry is copyright. It is produced through a collaboration between the Swiss Institute of Bioinformatics and the EMBL outstation - the European Bioinformatics Institute. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://www.isb-sib.ch/announce/ or send an email to license@isb-sib.ch).
Cross-references
EMBL
X07674; CAA30521.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
J03248; AAA52523.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
M20867; AAA52526.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
X07769; CAA30598.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66300; CAA46994.2; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66301; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66302; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66303; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66304; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66305; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66306; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66307; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66308; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66309; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66311; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
X66312; CAA46994.2; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
M37154; AAA52525.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
X67491; CAA47830.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A28208; DEHUE.
S00958; S00958.
HSSP P00366; 1HWX. [HSSP ENTRY / PDB]
SWISS-2DPAGE P00367; HUMAN.
Siena-2DPAGE P00367; -.
Genew HGNC:4335; GLUD1.
CleanEx HGNC:4335; GLUD1.
MIM 138130 [NCBI / EBI].
606762 [NCBI / EBI].
GeneCards GLUD1.
GeneLynx GLUD1; Homo sapiens.
SOURCE GLUD1; Homo sapiens.
Ensembl P00367; Homo sapiens. [Entry / Contig view]
InterPro IPR006095; GLFV_dehydrog.
IPR006096; GLFV_dehydrog_C.
IPR006097; GLFV_dehydrog_N.
Graphical view of domain structure.
Pfam PF00208; GLFV_dehydrog; 1.
PF02812; GLFV_dehydrog_N; 1.
PRINTS PR00082; GLFDHDRGNASE.
PROSITE PS00074; GLFV_DEHYDROGENASE; 1.
ProDom [Domain structure / List of seq. sharing at least 1 domain].
BLOCKS P00367.
ProtoNet P00367.
ProtoMap P00367.
PRESAGE P00367.
DIP P00367.
ModBase P00367.
Keywords
Oxidoreductase; NADP; Mitochondrion; Transit peptide; Polymorphism; Disease mutation; Multigene family.
Features
KeyFrom   To Length Description
TRANSIT   1    53  53     MITOCHONDRION.
CHAIN   54   558  505     GLUTAMATE DEHYDROGENASE 1.
BINDING   84    84        SUBSTRATE.
ACT_SITE   183   183        
VARIANT   318   318        R -> K (IN HHS).
/FTId=VAR_009270.
VARIANT   349   349        E -> A (IN HHS).
/FTId=VAR_009271.
VARIANT   380   380        I -> G.
/FTId=VAR_002261.
VARIANT   498   498        S -> L (IN HHS).
/FTId=VAR_008666.
VARIANT   499   499        G -> D (IN HHS).
/FTId=VAR_008667.
VARIANT   499   499        G -> S (IN HHS).
/FTId=VAR_008668.
VARIANT   501   501        S -> P (IN HHS).
/FTId=VAR_008669.
VARIANT   507   507        H -> Y (IN HHS).
/FTId=VAR_008670.
SEVIEWER logo Feature table viewer
Sequence information
Length: 558 AA [This is the length of the unprocessed precursor] Molecular weight: 61397 Da [This is the MW of the unprocessed precursor] CRC64: A7319A840F57FBB2 [This is a checksum on the sequence]
        10         20         30         40         50         60 
         |          |          |          |          |          | 
MYRYLGEALL LSRAGPAALG SASADSAALL GWARGQPAAA PQPGLALAAR RHYSEAVADR 

        70         80         90        100        110        120 
         |          |          |          |          |          | 
EDDPNFFKMV EGFFDRGASI VEDKLVEDLR TRESEEQKRN RVRGILRIIK PCNHVLSLSF 

       130        140        150        160        170        180 
         |          |          |          |          |          | 
PIRRDDGSWE VIEGYRAQHS QHRTPCKGGI RYSTDVSVDE VKALASLMTY KCAVVDVPFG 

       190        200        210        220        230        240 
         |          |          |          |          |          | 
GAKAGVKINP KNYTDNELEK ITRRFTMELA KKGFIGPGID VPAPDMSTGE REMSWIADTY 

       250        260        270        280        290        300 
         |          |          |          |          |          | 
ASTIGHYDIN AHACVTGKPI SQGGIHGRIS ATGRGVFHGI ENFINEASYM SILGMTPGFG 

       310        320        330        340        350        360 
         |          |          |          |          |          | 
DKTFVVQGFG NVGLHSMRYL HRFGAKCIAV GESDGSIWNP DGIDPKELED FKLQHGSILG 

       370        380        390        400        410        420 
         |          |          |          |          |          | 
FPKAKPYEGS ILEADCDILI PAASEKQLTK SNAPRVKAKI IAEGANGPTT PEADKIFLER 

       430        440        450        460        470        480 
         |          |          |          |          |          | 
NIMVIPDLYL NAGGVTVSYF EWLKNLNHVS YGRLTFKYER DSNYHLLMSV QESLERKFGK 

       490        500        510        520        530        540 
         |          |          |          |          |          | 
HGGTIPIVPT AEFQDRISGA SEKDIVHSGL AYTMERSARQ IMRTAMKYNL GLDLRTAAYV 

       550 
         | 
NAIEKVFKVY NEAGVTFT 

P00367 in FASTA format

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