ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by NCSC USMirror sites:Canada China Korea Taiwan USA
Search for

NiceProt View of Swiss-Prot: P02538

[General] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
General information about the entry
Entry name K2CA_HUMAN
Primary accession number P02538
Secondary accession numbers None
Entered in Swiss-Prot in Release 01, July 1986
Sequence was last modified in Release 33, February 1996
Annotations were last modified in    Release 41, February 2003
Name and origin of the protein
Protein name Keratin, type II cytoskeletal 6A
Synonyms Cytokeratin 6A
CK 6A
K6A keratin
Gene name
KRT6A or K6A
From
Homo sapiens (Human) [TaxID: 9606]
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo.
References
[1]
SEQUENCE FROM NUCLEIC ACID.
TISSUE=Skin;
MEDLINE=95355491; PubMed=7543104; [NCBI, ExPASy, EBI, Israel, Japan]
Takahashi K., Paladini R.D., Coulombe P.A.;
"Cloning and characterization of multiple human genes and cDNAs encoding highly related type II keratin 6 isoforms.";
J. Biol. Chem. 270:18581-18592(1995).
[2]
SEQUENCE FROM NUCLEIC ACID.
TISSUE=Ovary;
Strausberg R.;
Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases.
[3]
SEQUENCE OF 207-563 FROM NUCLEIC ACID.
MEDLINE=83259278; PubMed=6191871; [NCBI, ExPASy, EBI, Israel, Japan]
Hanukoglu I., Fuchs E.;
"The cDNA sequence of a Type II cytoskeletal keratin reveals constant and variable structural domains among keratins.";
Cell 33:915-924(1983).
[4]
VARIANT TYPE I PC ASN-170 DEL.
MEDLINE=95400309; PubMed=7545493; [NCBI, ExPASy, EBI, Israel, Japan]
Bowden P.E., Haley J.L., Kansky A., Rothnagel J.A., Jones D.O., Turner R.J.;
"Mutation of a type II keratin gene (K6a) in pachyonychia congenita.";
Nat. Genet. 10:363-365(1995).
Comments
  • FUNCTION: THERE ARE TWO TYPES OF CYTOSKELETAL AND MICROFIBRILLAR KERATIN: I (ACIDIC; 40-55 kDa) [K9 TO K20] AND II (NEUTRAL TO BASIC; 56-70 kDa) [K1 TO K8]. BOTH A BASIC AND AN ACIDIC KERATIN ARE REQUIRED FOR FILAMENT ASSEMBLY.
  • SUBUNIT: HETERODIMER OF A TYPE I AND A TYPE II KERATIN. KRT6 ISOMERS ASSOCIATE WITH KRT16 AND/OR KRT17.
  • TISSUE SPECIFICITY: CONSTITUTIVELY EXPRESSED IN DISTINCT TYPES OF EPITHELIA SUCH AS THOSE IN ORAL MUCOSA, ESOPHAGUS, PAPILLAE OF TONGUE AND HAIR FOLLICLE OUTER ROOT SHEATH.
  • DISEASE: DEFECTS IN KRT6A, AS WELL AS IN KRT16, HAVE BEEN FOUND TO BE ASSOCIATED WITH TYPE 1 PACHYONYCHIA CONGENITA (PC) ALSO KNOWN AS JADASSOHN-LEWANDOWSKY SYNDROME. TYPE I PC IS CHARACTERIZED BY ONCHYOGRYPOSIS, PALMOPLANTAR AND FOLLICULAR HYPERKERATOSIS AND ORAL LEUKOKERATOSIS.
  • MISCELLANEOUS: THERE ARE AT LEAST SIX ISOFORMS OF HUMAN TYPE II KERATIN 6 (K6), K6A BEING THE MOST ABUNDANT REPRESENTING ABOUT 77% OF ALL FORMS FOUND IN EPITHELIA.
  • SIMILARITY: BELONGS TO THE INTERMEDIATE FILAMENT FAMILY.
Copyright
This SWISS-PROT entry is copyright. It is produced through a collaboration between the Swiss Institute of Bioinformatics and the EMBL outstation - the European Bioinformatics Institute. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://www.isb-sib.ch/announce/ or send an email to license@isb-sib.ch).
Cross-references
EMBL
L42583; AAC41767.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42575; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42576; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42577; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42578; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42579; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42580; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
L42581; AAC41767.1; JOINED.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC008807; AAH08807.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
J00269; AAA36144.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
V01516; CAA24760.1; -.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A02944; KRHUEA.
Genew HGNC:6443; KRT6A.
CleanEx HGNC:6443; KRT6A.
MIM 148041 [NCBI / EBI].
167200 [NCBI / EBI].
GeneCards KRT6A.
GeneLynx KRT6A; Homo sapiens.
SOURCE KRT6A; Homo sapiens.
Ensembl P02538; Homo sapiens. [Entry / Contig view]
InterPro IPR001664; IF.
IPR003054; Keratin_II.
Graphical view of domain structure.
Pfam PF00038; filament; 1.
PRINTS PR01276; TYPE2KERATIN.
PROSITE PS00226; IF; 1.
ProDom [Domain structure / List of seq. sharing at least 1 domain].
BLOCKS P02538.
ProtoNet P02538.
ProtoMap P02538.
PRESAGE P02538.
DIP P02538.
ModBase P02538.
SWISS-2DPAGE Get region on 2D PAGE.
Keywords
Intermediate filament; Coiled coil; Keratin; Multigene family; Disease mutation; Phosphorylation.
Features
KeyFrom   To Length Description
INIT_MET   0     0        BY SIMILARITY.
DOMAIN   1   161  161     HEAD.
DOMAIN   162   471  310     ROD.
DOMAIN   472   563  92     TAIL.
DOMAIN   162   197  36     COIL 1A.
DOMAIN   198   216  19     LINKER 1.
DOMAIN   217   308  92     COIL 1B.
DOMAIN   309   332  24     LINKER 12.
DOMAIN   333   471  139     COIL 2.
SITE   413   413  1     STUTTER.
MOD_RES   59    59        PHOSPHORYLATION (BY SIMILARITY).
VARIANT   170   170        MISSING (IN TYPE I PC).
/FTId=VAR_003878.
CONFLICT   394   394        I -> S (IN REF. 3).
FT aligner logo Feature aligner
SEVIEWER logo Feature table viewer
Sequence information
Length: 563 AA Molecular weight: 59913 Da CRC64: DEDD89037ED26CEE [This is a checksum on the sequence]
        10         20         30         40         50         60 
         |          |          |          |          |          | 
ASTSTTIRSH SSSRRGFSAN SARLPGVSRS GFSSVSVSRS RGSGGLGGAC GGAGFGSRSL 

        70         80         90        100        110        120 
         |          |          |          |          |          | 
YGLGGSKRIS IGGGSCAISG GYGSRAGGSY GFGGAGSGFG FGGGAGIGFG LGGGAGLAGG 

       130        140        150        160        170        180 
         |          |          |          |          |          | 
FGGPGFPVCP PGGIQEVTVN QSLLTPLNLQ IDPTIQRVRA EEREQIKTLN NKFASFIDKV 

       190        200        210        220        230        240 
         |          |          |          |          |          | 
RFLEQQNKVL ETKWTLLQEQ GTKTVRQNLE PLFEQYINNL RRQLDSIVGE RGRLDSELRG 

       250        260        270        280        290        300 
         |          |          |          |          |          | 
MQDLVEDFKN KYEDEINKRT AAENEFVTLK KDVDAAYMNK VELQAKADTL TDEINFLRAL 

       310        320        330        340        350        360 
         |          |          |          |          |          | 
YDAELSQMQT HISDTSVVLS MDNNRNLDLD SIIAEVKAQY EEIAQRSRAE AESWYQTKYE 

       370        380        390        400        410        420 
         |          |          |          |          |          | 
ELQVTAGRHG DDLRNTKQEI AEINRMIQRL RSEIDHVKKQ CANLQAAIAD AEQRGEMALK 

       430        440        450        460        470        480 
         |          |          |          |          |          | 
DAKNKLEGLE DALQKAKQDL ARLLKEYQEL MNVKLALDVE IATYRKLLEG EECRLNGEGV 

       490        500        510        520        530        540 
         |          |          |          |          |          | 
GQVNISVVQS TVSSGYGGAS GVGSGLGLGG GSSYSYGSGL GVGGGFSSSS GRAIGGGLSS 

       550        560 
         |          | 
VGGGSSTIKY TTTSSSSRKS YKH 

P02538 in FASTA format

View entry in original Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Search the SWISS-MODEL Repository
ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by NCSC USMirror sites:Canada China Korea Taiwan USA